Publications

Immunopeptidomics: Reading the Immune Signal That Defines Self From Nonself.Thibault P, Perreault CMol Cell Proteomics 2022-05-11;21(6):100234.

Immunopeptidomic analyses of colorectal cancers with and without microsatellite instability.Cleyle J, Hardy MP, Minati R, Courcelles M, Durette C, Lanoix J, Laverdure JP, Vincent K, Perreault C, Thibault PMol Cell Proteomics 2022-05-01;21(5):100228.

The microprotein Nrs1 rewires the G1/S transcriptional machinery during nitrogen limitation in budding yeast.Tollis S, Singh J, Palou R, Thattikota Y, Ghazal G, Coulombe-Huntington J, Tang X, Moore S, Blake D, Bonneil E, Royer CA, Thibault P, Tyers MPLoS Biol 2022-03-01;20(3):e3001548.

Autolysosomes and caspase-3 control the biogenesis and release of immunogenic apoptotic exosomes.Beillevaire D, Migneault F, Turgeon J, Gingras D, Rimbaud AK, Marcoux G, Spino C, Thibodeau N, Bonneil E, Thibault P, Boilard E, Dieudé M, Hébert MJCell Death Dis 2022-02-11;13(2):145.

MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets.Kovalchik KA, Ma Q, Wessling L, Saab F, D Duquette J, Kubiniok P, Hamelin DJ, Faridi P, Li C, Purcell AW, Jang A, Paramithiotis E, Tognetti M, Reiter L, Bruderer R, Lanoix J, Bonneil E, Courcelles M, Thibault P, Caron E, Sirois IMol Cell Proteomics 2021-11-17;21(1):100178.

CAMAP: Artificial neural networks unveil the role of codon arrangement in modulating MHC-I peptides presentation.Daouda T, Dumont-Lagacé M, Feghaly A, Benslimane Y, Panes R, Courcelles M, Benhammadi M, Harrington L, Thibault P, Major F, Bengio Y, Gagnon E, Lemieux S, Perreault CPLoS Comput Biol 2021-10-22;17(10):e1009482.

Early defects in mucopolysaccharidosis type IIIC disrupt excitatory synaptic transmission.Pará C, Bose P, Bruno L, Freemantle E, Taherzadeh M, Pan X, Han C, McPherson PS, Lacaille JC, Bonneil E, Thibault P, O'Leary C, Bigger B, Morales CR, Di Cristo G, Pshezhetsky AVJCI Insight 2021-08-09;6(15).

Proteomic strategies for characterizing ubiquitin-like modificationsChongyang Li, Trent G. Nelson, Alfred C. O. Vertegaal & Pierre Thibault  2021-07-29;1(53).

Integration of Segmented Ion Fractionation and Differential Ion Mobility on a Q-Exactive Hybrid Quadrupole Orbitrap Mass Spectrometer.Pfammatter S, Wu Z, Bonneil E, Bailey DJ, Prasad S, Belford M, Rochon J, Picard P, Lacoursière J, Dunyach JJ, Thibault PAnal Chem 2021-07-20;93(28):9817-9825.

A bacterium-derived, cancer-associated immunopeptidome.Perreault C, Thibault P, Kroemer GOncoimmunology 2021-05-03;10(1):1918373.

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